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IRODS
iRODS is often deployed to capture products from systems that generate new files in a regular way (sequencers, telescopes, microscopes, sensor networks, etc.). The automated ingest framework can be configured to watch locations for new files and extract metadata, define manifests, and otherwise prepare them for use by the rest ofthe system.
IRODS
Python (python-irodsclient) API, Python, Implements the iRODS RPC API. iRODS Capability Automated Ingest. CLI, Python, Parallel ingest/sync from filesystems and S3. AWS Lambda Function - S3. Lambda, Python, Updates an iRODS Catalog with create, rename, delete events from oneor
IRODS
Aptiv deployed iRODS in production around 1.5 year ago, together with the start of the development phase of one of the big projects on autonomous driving. The tool was selected after a few POC installations. The major advantage of iRODS we recognized at the time was a number of side projects and plugins available.IRODS
iRODS: Managing Data from the Edge to HPC. Data management has historically started at the point of ingest where users manually placed data into a system. While this process was sufficient for a while, the volume and velocity of automatically created data coming from sequencers, satellites, and microscopes have overwhelmed existingsystems.
IRODS DOCUMENTATION
iRODS Documentation. Master. Latest Release. 4.2.8; Older Releases. 4.2.7; 4.2.6; 4.2.5; 4.2.4; 4.2.3; 4.2.2; 4.2.1ADMINISTRATOR
Modify the paths for existing iRODS files (data-objects) to match a change of the resource path that had been done via 'iadmin modresc Resc path'. This is only needed if the physical files and directories of existing iRODS files have been moved, via tools outside of FEDERATION - IRODS DOCS Federation with iRODS 3.x. iRODS 4.0+ has made some additions to the database tables for the resources ( r_resc_main) and data objects ( r_data_main) for the purposes of tracking resource hierarchy, children, parents, and other relationships. These changes would have caused a cross-zone query to fail when the target zone is iRODS 3.x. USERS AND PERMISSIONS Additionally, permissions can be managed via user groups in iRODS. A user can belong to more than one group at a time. The owner of a Data Object has full control of the file and can grant and remove access to other users and groups. The owner of a Data Object can also give ownership rights to other users, who in turn can grant or revokeaccess
NASA USE CASE
National Aeronautics and Space Administration! Challenges" • Finding observational and model data for use in climate and weather studies! • Accessing the geographically distributed data! • Managing the massive digital holdings, which are measured in petabytes and hundreds of millions of files! IRODSDOWNLOADROADMAPCLIENTSDOCUMENTATIONHUBLICENSE Each iRODS Server runs a Rule Engine that is an event-triggered background process. The Rule Engine is programmed using iRODS Rules, which specify what actions should be triggered when iRODS initiates a particular system activity. iRODS event triggers are called Policy Enforcement Points (PEPs). Consider, for example, a rule to transferIRODS
iRODS is often deployed to capture products from systems that generate new files in a regular way (sequencers, telescopes, microscopes, sensor networks, etc.). The automated ingest framework can be configured to watch locations for new files and extract metadata, define manifests, and otherwise prepare them for use by the rest ofthe system.
IRODS
Python (python-irodsclient) API, Python, Implements the iRODS RPC API. iRODS Capability Automated Ingest. CLI, Python, Parallel ingest/sync from filesystems and S3. AWS Lambda Function - S3. Lambda, Python, Updates an iRODS Catalog with create, rename, delete events from oneor
IRODS
Aptiv deployed iRODS in production around 1.5 year ago, together with the start of the development phase of one of the big projects on autonomous driving. The tool was selected after a few POC installations. The major advantage of iRODS we recognized at the time was a number of side projects and plugins available.IRODS
iRODS: Managing Data from the Edge to HPC. Data management has historically started at the point of ingest where users manually placed data into a system. While this process was sufficient for a while, the volume and velocity of automatically created data coming from sequencers, satellites, and microscopes have overwhelmed existingsystems.
IRODS DOCUMENTATION
iRODS Documentation. Master. Latest Release. 4.2.8; Older Releases. 4.2.7; 4.2.6; 4.2.5; 4.2.4; 4.2.3; 4.2.2; 4.2.1ADMINISTRATOR
Modify the paths for existing iRODS files (data-objects) to match a change of the resource path that had been done via 'iadmin modresc Resc path'. This is only needed if the physical files and directories of existing iRODS files have been moved, via tools outside of FEDERATION - IRODS DOCS Federation with iRODS 3.x. iRODS 4.0+ has made some additions to the database tables for the resources ( r_resc_main) and data objects ( r_data_main) for the purposes of tracking resource hierarchy, children, parents, and other relationships. These changes would have caused a cross-zone query to fail when the target zone is iRODS 3.x. USERS AND PERMISSIONS Additionally, permissions can be managed via user groups in iRODS. A user can belong to more than one group at a time. The owner of a Data Object has full control of the file and can grant and remove access to other users and groups. The owner of a Data Object can also give ownership rights to other users, who in turn can grant or revokeaccess
NASA USE CASE
National Aeronautics and Space Administration! Challenges" • Finding observational and model data for use in climate and weather studies! • Accessing the geographically distributed data! • Managing the massive digital holdings, which are measured in petabytes and hundreds of millions of files!IRODS
Aptiv deployed iRODS in production around 1.5 year ago, together with the start of the development phase of one of the big projects on autonomous driving. The tool was selected after a few POC installations. The major advantage of iRODS we recognized at the time was a number of side projects and plugins available.IRODS
News / 09 June 2021 iRODS Consortium Announces Leadership Transitions. The Renaissance Computing Institute (RENCI) - the founding member that administers the iRODS Consortium - announced today that Jason Coposky has officially resigned from his post asIRODS
Just over six weeks until our 2021 iRODS User Group Meeting. We have a draft list of talks from the Consortium. We have around 40 registrations (and counting). We have T-shirts and stickers being printed. It's all coming together mostly. 4.2.9 will be ready. 4-2-stable has just seen write locks merged, along with additionalcleanups for
IRODS
iRODS: Managing Data from the Edge to HPC. Data management has historically started at the point of ingest where users manually placed data into a system. While this process was sufficient for a while, the volume and velocity of automatically created data coming from sequencers, satellites, and microscopes have overwhelmed existingsystems.
IRODS
iRODS is really the only platform for policy managed data preservation. It does indeed virtualize storage, providing a global, logical namespace over heterogeneous types of storage, but it also allows you to enforce preservation policies at each storage location, no matter what client or access method is used. WHY IRODS? - IRODS DOCS iRODS, the Integrated Rule-Oriented Data System, is a state-of-the-art open source software system for addressing the key data management tasks that face users as the size and complexity of digital data collections continue to grow rapidly. Because the principal data management tasks are highly interrelated, rather than taking apiecemeal
RELEASE NOTES
4.2.9. Release Date: 2021-06-07. Enhancements. Add rule priority to delayed rules Move delay server context into database USING IRODS AS AN ENTRY POINT TO VITAM FOR LONG-TERM DATA IRODS workflow presentation An archival agency submits a new object « Read » permission given to the « rods » user This object is then converted to a SEDA 2.1 archive with the Resip tool The initial object is deleted from iRODS Metadata ARCHIVED is set to « False » The SEDA 2.1 archive is sent to VITAM via its API (POST) VITAM replies with aX-Request-Id
IRODS PACKAGES
iRODS Packages This server hosts both APT and YUM repositories for the iRODS Consortium. Installation Add this server to your package manager's list of repositories to check for new software.USER - IRODS DOCS
The extracted subfiles and subdirectories will appeared as normal iRODS files and sub-collections. The 'ibun -c' command can be used to tar/bundle an iRODS collection into a tar file. For example, to upload a directory mydir to iRODS: tar -chlf mydir.tar -C /x/y/z/mydir . iput -Dtar mydir.tar . ibun -x mydir.tar mydir.Toggle navigation
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__ Register Now - Virtual iRODS User Group Meeting 2020 - June9-12, 2020
OPEN SOURCE DATA MANAGEMENT SOFTWAREDownload iRODS
THE FOUR CORE COMPETENCIES OF IRODS -------------------------DATA VIRTUALIZATION
Data stored in iRODS is typically accessed through an iRODS client. iRODS clients present files as Data Objects organized into Collections. For the most part, there is little difference between Data Objects and files, and between Collections and subdirectories. However, there are a couple of important distinctions: • Collections make no reference to the physical storage path. It is possible for two Data Objects in a Collection to be stored in different physical locations. • A Data Object may refer to multiple Replicas. Replicas are exact copies of a file, located in multiple physical locations. Data Objects and Collections are stored in Storage Resources in aniRODS Zone.
Each Storage Resource has a name (the Resource’s logical representation) and a hostname and path (the physical representation of the Resource, where files are kept). The hostname is the network name of the device that serves the data, and the path__ is the local file system path or object storage bucket that holds the data. -------------------------DATA DISCOVERY
This information about data, called metadata, is extremely useful for Data Discovery, locating relevant data within large data sets. Data Object metadata includes rich, user-defined metadata in addition to traditional system metadata, such as filename, file size, and creation date. This rich metadata allows data to be identified by characteristics such as author names, keywords, case ID, and contenttype.
Rich metadata can include whatever descriptors you choose to apply to your data. Rich metadata can also be applied to Collections, Users, Resources, and other iRODS Zones. The entire iRODS catalog for a Zone is contained in a relational database.__ Currently, that database must be hosted in a PostgreSQL, MySQL, or Oracle database managementsystem.
-------------------------WORKFLOW AUTOMATION
Each iRODS Server runs a Rule Engine that is an event-triggered background process. The Rule Engine is programmed using iRODS Rules, which specify what actions should be triggered when iRODS initiates a particular system activity. iRODS event triggers are called Policy Enforcement Points (PEPs). Consider, for example, a rule to transfer ownership of data objects to the project manager when a user is deleted; the trigger — or PEP — is the deletion of the user. Similarly, rules could be written to extract metadata or pre-process data whenever a file is uploaded to aniRODS Resource.
Chaining rules and PEPs allows you to create powerful, customized workflows that save time and prevent human error. Complex multi-step scientific processes can be tightly managed and automated by keeping thorough records of ongoing status and other lab information, and only alerting humans when necessary.__ Organizational data management policy can be captured in an automated, auditable fashion using iRODSrules.
------------------------- SECURE COLLABORATION Even in fields where data may not be published, it is usually necessary to share data sets between multiple workgroups. However, as data sets grow beyond several gigabytes, it becomes difficult to impossible to move the data between locations. iRODS provides Secure Collaboration through three technologies: Tickets, Permissions, and Federation. • iRODS Tickets provide controlled public access to Data Objects and Collections. The owner of a Data Object or Collection can create a Ticket and share it with non-iRODS users to grant them read or write access. Tickets can be revoked, and they can be set to automatically expire upon a specified date and time or a specified number of readsor writes.
• iRODS Permissions are analogous to UNIX file system permissions. The owner of a Data Object or Collection can assign read or write access for any number of defined iRODS Users and Groups. Group membership is defined by the administrator(s) of a Zone. • iRODS Federation extends data sharing and publication beyond a single Zone. In a Federated deployment, once the administrators of two iRODS Zones share a set of keys, the owner of a Data Object or Collection can assign read and write permissions to users from outside Zones. When reading or writing data, the transfer mechanism is analogous to that for a single Zone. Unless the file is very small, iRODS servers broker a connection between the server containing the data and the client requesting it. As a result, Federation enables high performance access to data stored in any other iRODS Zone.WHAT IS IRODS?
The Integrated Rule-Oriented Data System (iRODS) is open source data management software used by research, commercial, and governmental organizations worldwide. iRODS is released as a production-level distribution aimed at deployment in mission critical environments. It virtualizes data storage resources, so users can take control of their data, regardless of where and on what device the data is stored. The development infrastructure supports exhaustive testing on supported platforms. The plugin architecture supports microservices, storage systems, authentication, networking, databases, rule engines, and an extensibleAPI.
WHO USES IRODS?
iRODS has been deployed in thousands of locations worldwide, across industries as diverse as oil and gas, life sciences, physical sciences, archives and records management, and media andentertainment.
WHO SUSTAINS IRODS?
Find out more about our members here.
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